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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… upstream and downstream, which is how the EPA, it’s one of the indices they use for stream health, they look at … coupled to microbiome science. I mean, I’m really, it’s not hyperbole, I think like it’s, it’s this unique time … See you next time. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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IMA genome-F18
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Decoding Yellowstone’s Microbial Mats
Life as we know it wouldn’t exist without cyanobacteria; they began oxygenating … billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria are living, …
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JGIota: A Surprise for Chloroflexota — The First Flagella!
To understand how organisms adapt to extreme environments, Marike Palmer and … Brian Hedlund study organisms living in hot springs. Hear how their recent work revealed more about the history of the Chloroflexota …
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Effects of Polar Light Cycle on Microbial Food Web
… where organisms higher up in the food web like fish do not exist, nutrient cycling takes place only on a microbial … Ocean have found that in winter months, when sunlight is nonexistent, the bacteria are replaced by carbon-fixing … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across California State University campuses for … also the chair of the JGI User Executive Committee, on how that study went from the lab to the classroom. …
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JGI-KBase Panel at SACNAS
… 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific contribution? This session will demonstrate to students (and their mentors) how to … and Programs, and introduce best practices for anyone to get credit for their contributions to science. A …
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Exploring Phages at JGI
… student, I never really entertained the possibility of working at a national laboratory. However, through the JGI-UC Merced internship program, I was able to collaborate with extraordinary scientists and …
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Party in the Rhizosphere
… that plants secrete through their roots, creating a lively zone called the rhizosphere. In this episode, biologist Jennifer Pett-Ridge of Lawrence Livermore National Laboratory has your backstage pass. …
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Krishna Palaniappan
… for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …
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Crysten Blaby-Haas
… of the Biomolecular Materials Initiative, a partnership between JGI and the Molecular Foundry, a nanoscale research and … user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … SS. (2014) Evolution of a plant- specific copper chaperone family for chloroplast copper homeostasis. PNAS  …
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Marcel Huntemann
… of several production pipelines (gene calling, functional annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data exchange and …
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