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Director, DOE Joint Genome Institute Read a synthesis from the panel discussion  here . Contact  Robin Johnston … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …

… and thrive — some varieties grow their leafy stalks 16 to 18 feet into the air. Beyond being a staple grain eaten … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have cited that …

… the ocean through vents at temperatures that can exceed 750 degrees Fahrenheit. The minerals in these fluids include … and other microorganisms that live there.  Researchers from Portland State University and the University of … at Lawrence Berkeley National Laboratory, contributed metagenomic sequencing to the study as well as  genome analysis, …

Korea as well as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley … found that these enzymes have evolved distinctly from both core and specialized enzymes. Even during … using bioinformatic software called FastTree and identified 62 distinct AT groups. However, no single AT group was …

… new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up genomics analysis to peta-bases, and enabling data-driven … metagenome binning software … Education … Selected Publications … Software …

… by combining a study of microbial communities (metagenomics) and a chemical labelling approach. The Impact … foreign genetic elements by incorporating short sequences from infecting viruses and phages. In these sequences are … yet abundant subsurface organisms was  recently reported in Nature Communications. The work was co-led by …

… laboratory ecosystems to help transition microbiome science from largely observational to reproducible mechanistic …

… for novel research projects — aligned with DOE missions and from PIs who have not led any previously-accepted proposals …

… faculty members may invite up to two student participants from the faculty member’s home academic institution, one of …

… their host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, California, scientists have … a more systematic picture through single-cell and metagenomic sequencing. A team co-led by Mária Džunková, … and archaeal cells — and detected the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then …

That work published in Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and … the third is determining the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given … experimentally verified in S. coelicolor . With results from the research, RIViT-seq data have increased the …

… preceded by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, … began in 2014, pairs undergraduate and graduate students from UC Merced with at least one JGI mentor. Together, they …