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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely … in helping scientists link plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … cool intermediate to the ocean’s extremes of about 28° and 97° Fahrenheit. “The study authors point to this fundamental observation of cold and warm microbial networks, and just how clear and stark the …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings … scientists from academia, industry, and government organizations for three days of scientific presentation, … and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …
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JGI@25: Building a Better Bean
… 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online … for large producers. The team sequenced and assembled a 473-million basepair genome of the common bean, identifying …
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The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the information technology company … “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to … more than 13 petabytes of data, accessible through the Genome Portal. “The task of making data more findable and …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, … JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further …     Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and …
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Exploring the Diversity of the American Prairie’s Switchgrass
A tall native plant of the North American prairie, switchgrass ( Panicum virgatum ) has long been a tantalizing potential biofuel feedstock. But switchgrass has a complex genome and, as a species, encompasses dizzying diversity. …
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Crysten Blaby-Haas
… and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area (SFA). In 2022, she joined … user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … AT, Blaby-Haas CE. (2024) Machine learning sheds light on microbial dark proteins. Nature Rev Micro 22, 63. Davidi L, …
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Three Join the JGI User Executive Committee
… earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of Oak Ridge National … Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological Society of … biogeochemical cycles in soils and sediments and plant-microbial interactions in crops. He has been a PI or Co-PI …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: Integrating Experimentation with Data.” …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… to the end of a nine-week virtual internship. The celebration was preceded by short final presentations attended by more than 75 JGI staff. According to Axel Visel and Zhong Wang, …
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