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Marine Microbe Contains Multitudes
… periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Progress Reports: 2002–2020
… pdfs of previous Progress Reports from the Joint Genome Institute.  …
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Exploring Polymorphisms Created by Transposable Elements
… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that …
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An Addiction Crucial to a Fungus’ Reproduction
… at Cornell University and scientists at the Joint Genome Institute, a DOE Office of Science User Facility was … while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As reported in the November 29, 2017 issue …
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The fungus that made itself at home
… of Oslo scientists and including researchers at the Joint Genome Institute, a DOE Office of Science User Facility, compared the genomes of two strains of fungi Serpula lacrymans – var. … access. While S. lacrymans var. shastensis has a similar genome, the team suggests that it has not adapted like the …
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IMA genome-F18
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … The transcriptomes edit out these distractions. Combining genome and transcriptome information allowed the team to … team worked with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and insightful …
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Nick Everson
… and logistics activities.  He returned to the Joint Genome Institute after serving as the Chief Operating …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… gene expression: one of the first cross-kingdom spatially-resolved transcriptomics studies to date. This paper  is the … scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to …
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The Big Deal About Short Plants
… plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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JGI@25: Building a Better Bean
… of the University of Georgia sequenced and analyzed the genome of the common bean. That work was published online … The team sequenced and assembled a 473-million basepair genome of the common bean, identifying genes related to … across many different labs to be able to sequence a genome.” Since the paper was published in 2014, it has been …
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