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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric … regulate Earth’s climate. Most methane is produced in environments without oxygen through a process called … enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Matthew Kellom
Matt is broadly interested in the interactions between microbial life and environment, and using … interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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Neha Varghese
… bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced analysis …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At … hosts are microbes like bacteria, not humans. With metagenomic sequencing, researchers have found more of these … led by scientists at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial … mats — to reveal how these systems adapt and contribute to global biogeochemical cycles. Additional … awardee.  The CSP Annual call is focused on large-scale genomic science projects relevant to the DOE’s Office of …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies related to her thesis on cone … student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in …
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Crops as Tough as World Cup Turf
… need corn, sorghum and other crops to grow well in worse conditions: with more heat, less water and less fertilizer. Grasses do better in these conditions, so plant biologists James Schable, Guangchao Sun …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts … carbon captured from the atmosphere in a process that generates energy. The MPI team ultimately aims to develop an … Program (CSP) of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … — cupids of the plant world facilitating the remixing of genes in the next generation of flowering vegetation. In … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US Department of …
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A Mentor’s Perspective on Training the Next Generation
JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. In one way or another, they’ve all mentioned how …
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Clarence Le
… novel clades of RNA viruses and determines novel viral gene functions that may impact hosts and host populations. …
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