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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading … the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, …
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton fields look like … Berkeley National Laboratory (Berkeley Lab) has now sequenced and assembled the genomes of these five cotton … insights on crop improvements at a genetic level, including why having multiple copies of their genomes (polyploidy) is …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a … relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing …
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Eelgrass Proves to Be Much Younger Than We Thought
The Science Eelgrass, one of the most abundant plants in the ocean, originated in Japan before spreading around … last 20,000-40,000 years, establishing itself in Atlantic coastal areas off the shores of places including North … locations.  One group investigated changes in protein sequences, while others analyzed single point mutations …
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements metagenomics studies. The … between the analyzed community members. The Impact Though microbes help regulate the planet’s nutrient cycles and are … snippets of microbial genomes directly from environmental sequence data, by piecing each genome together from large …
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Rare earth element alcohol dehydrogenases widely occur among globally distributed, numerically abundant and environmentally important microbes
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The United States Culture Collection Network (USCCN): Enhancing Microbial Genomics Research through Living Microbe Culture Collections
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … of all the other letters of the alphabet. Yet the specific sequence of these four letters represents an organism’s …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was … research focuses on how viruses influence carbon cycling in coastal mangroves. His work centers on samples collected on …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … (Berkeley Lab), has produced a high-quality reference sequence of the complex switchgrass  genome using samples … many parts of the country also helped the team understand why some switchgrass plants from the Northeast have traits …
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JGI-USCCN Strain Sequencing Opportunity
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