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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated … by researchers at the Max Planck Institute (MPI) for Marine Microbiology has developed, tested and deployed a pipeline … postdoctoral researcher Anissa Grieb at the MPI for Marine Microbiology worked with researchers at the U.S. Department …
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Pinning Down a Piece of Photosynthesis
… and cyanobacteria create the air we breathe and the fuel for food webs as they turn carbon dioxide and water into … of metallic protein that no one’s ever had a structure of before,” said Crysten Blaby-Haas, a research scientist at the … University in St. Louis and the University of California at Berkeley, as well as other DOE user facilities — …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on … the trees in his backyard. Originally from northern California and one of the first students to participate in the … only about 3% of the planet’s landmass, peat moss and their subsurface bogs hold over 30% of the world’s carbon. “This …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… of the Microbiome Data Prize by the American Society for Microbiology (ASM). Roux leads the Viral Genomics group … the development of the virus and plasmid workflows for the National Microbiome Data Collaborative.  This award …
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How Filamentous Fungi Sense Food
… Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to reconstruct … hemicellulose. The Impact N. crassa is the model organism for filamentous fungi, all of which contain a wide array of … components present in plant biomass. This is of interest for bioenergy researchers looking to improve the industrial …
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Natural Prodcast Episode 5: Brad Moore
… and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … Oceanography. And Brad and I, Alison, have known each other for quite a while because Brad was my postdoctoral advisor.  … Brad: Oh my goodness. Those were good years, Dan!  Dan: For too many years. Brad: And now look, you’re like, famous. …
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Simon Roux
… link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of viral ecogenomics. For this role, Dr. Roux can rely on more than 10 years of … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data …
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Cataloging the Microbes that Manage the Health of River Systems
… States. They also provided multiple access points to the information. The team harnessed a community-science program to … available, river-focused microbial resource that provides information at multiple scales from genes to the community … a consortium to study river microbiomes. To understand the microbiology of watershed systems, they utilized over 160 …
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Forming Scientific Connections and Building Community
… experiences and what they’ll take with them as they go forward in their careers.   Listed below are the interns, … “ Development of a multiplex genomic integration system for the selection of genes essential for specialized carbon utilization ” Jesica Calderon : …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all … retired Naval Commander retires from Berkeley Lab. For the last 15 years, Ray Turner has been one constant for … address some of the most pressing challenges of our time. For more information, please visit  …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … from Ed Hall, an ecologist at Colorado State University in Fort Collins. He’s part of a JGI-supported project studying … portion of the Arkansas River that’s just a little west of Fort Collins, near a city called Leadville. ED:   And, uh, …
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