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Nick Everson
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the … around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the …
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Fungal Friends or Foes in Plant Roots
… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis … gaps on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome …
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Metagenomic Analysis of Subtidal Sediments from Polar and Subpolar Coastal Environments Highlights the Relevance of Anaerobic Hydrocarbon Degradation Processes
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The Power of One, Amplified
… that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with … technologies and bioinformatic tools have helped decode the genomes of tens of thousands of previously unknown and … bioinformatics tools for  extracting snippets of microbial genomes directly from environmental sequence data, by …
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A Complex Confection Decoded: Sugarcane Reference Genome
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their ancestors. The method was tested on a number of plants, including  genomes of cotton lineages and the  oilseed crop false flax …
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Annual Genomics of Energy & Environment Meeting
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Krishna Palaniappan
… for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … the world, finding over 125,000 partial and complete viral genomes. That study multiplied the number of known viral … year, the JGI expanded its existing Integrated Microbial Genomes & Microbiomes database to include a dedicated …
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PhycoCosm Tutorial
… the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed …
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Enlarging Windows into Understanding Gene Functions
… it can also serve as a stepping stone to studying many genomes simultaneously through multiDAP, which allows … researchers to conduct comparative analyses across the genomes of multiple species in a single experiment. … you can identify conserved binding patterns shared between genomes of different species. This can provide insights into …
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