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Virus-Microbe Interactions of Mud Island Mangroves
University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science … wetlands in south Texas,” he explained. “In terms of my project, I wanted to incorporate that CSP, but also look at …
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DOE JGI Interns Share Their Summer Experiences
… the field, work at the lab bench, and also do some computational analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, among the interns were two undergraduate … worked with Zhong Wang’s group on an aspect of the same project assigned to Sharon and Cristhian; and, Lizhen Shi , …
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San … science opportunities. Learn how to apply for a project with the JGI Community Science Program, and how you … a list of talks relevant to JGI science at PAG XXVII. On January 14, JGI Plant Program head Jeremy Schmutz and  …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected as the 2025 recipient of … as part of the Early Career Research Program (ECRP). His project, “Characterizing Virus-Driven Alterations of …
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You Can Move, But You Can’t Hide
… and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found … called geNomad identifies and classifies MGEs based upon their gene content and their genetic sequences. The … used computational resources from the Exascale Computing Project (17-SC-20-SC), a collaborative effort of the U.S. …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have … source of both protein and oil was also the largest plant project completed by the JGI. It has since been cited more than 5,400 times, including a number of projects that point to the potential of seed oils as …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … University in Fort Collins. He’s part of a JGI-supported project studying the world’s rivers and their microbial … its health.  He sat down with me to talk about his project, and riffed a bit on what it means in a more global …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
On September 1, JGI held a JGI Engagement: Pro Tips for … to reach that maximum with broader questions and broader project scope? A: Focus on strong science and well-thought-out questions. We are looking for projects that can’t easily be done at a core facility, but …
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JGI User Executive Committee Expands
… of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the … environments. He’s been involved in several plant genome projects through the Community Science Program. As a UEC … She’s also participated in the 1000 Fungal Genomes Project and has an interest in cross-disciplinary …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  … through the  CSP New Investigator call . It is the first project to have successfully evolved into a full-scale … the Tiny Earth collection. The work builds upon a pilot project to sequence antimicrobial-producing strains. …
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NeLLi — Symposium on New Lineages of Life
… “NeLLi 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, … Program Tanja Woyke, Microbial Program Robert Bowers,  User Project Coordination Rekha Seshadri,  Functional Annotation …
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Better Genome Editing for Bioenergy
… technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by … four genes, including one with no prior known function. The project’s success demonstrates how to sharpen the …
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