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Quantitative genetic-by-soil microbiome interactions in a perennial grass affect functional traits
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Bioinformatics Analysis Tools for Studying Microbiomes at the DOE Joint Genome Institute
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metagRoot: a comprehensive database of protein families associated with plant root microbiomes
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STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies
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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum
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Taking Stock of the Known and Unknown Microbial Space
… the microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.  “We … a member of the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all … key roles in regulating global nutrient cycles. The information gained from understanding the interactions between …
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Natural Prodcast Episode 18: A CSP Primer
… It’s been a while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, you’re going to hear my last … related to human health or creating vaccines, human gut microbiomes. We don’t do things related to human health. In …
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Tanja Woyke
… was the symbiont community of a gutless oligochaete for which she deciphered function and host-symbiont … an Adjunct Scientist appointment at the Bigelow Laboratory for Ocean Sciences since 2012 and an Adjunct Professor at the University of California, Merced's School of Natural Sciences since 2015. …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and ready for the public to tear it up. I’m super excited about this … thing I can point people to when it comes to getting out information about both SMC, and Jackie, so please do hop over …
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JGI Scientists Pen Genome Watch Articles
… Woyke and other JGI researchers made their debut writing for the Nature Reviews Microbiology column last year — and … published January 27, is about engineering plants and their microbiomes for more sustainable agriculture and was written … to (meta)genomics, and at least one of the papers they reference should be hot off the press. She tells prospective …
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Metatranscriptomic Sequencing of a Cyanobacterial Soil-Surface Consortium with and without a Diverse Underlying Soil Microbiome
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