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Len Pennacchio
DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Genome Institute, Senior Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. …
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Partners
… our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA … and other efforts. The JGI works closely with DOE computational facilities (e.g., the National Energy Research … Knowledgebase (KBase) and the National Microbiome Data Collaborative (NMDC)—to provide access to datasets, workflows, …
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CSP New Investigator Call
The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … the JGI’s sample requirements . Samples that are not available in a timely manner will delay processing, while …
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between … data set will help identify how different elements of the ecosystem interact and respond to changes in the … feedstock. Public accessibility to the data made available through this multidisciplinary approach allows …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or harm … host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Their findings were described in …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Specific understanding of this …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Specific understanding of this …
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Partnerships: Myco-Ed
Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: train students and … and publicly available datasets encompassing a wide array of fungal genomes, along with curated metadata to enable …
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CSP Functional Genomics
Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … achievable without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … — in the cyanobacterium  Synechocystis . Through an array of experiments at universities and national user … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Structurally, this protein is …
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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