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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … through a single research proposal: Maximize Your Research by Harnessing Multiple Scientific User Facilities in One … above-ground greenhouse gas fluxes with subsurface nutrient cycling at an intensively-managed cattle grazing …
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding … the origin, evolution, and diversity of plants and animals by combining computational genome analysis, sequence-based … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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Nandita Nath
Nandita is involved in developing new methods to improve genome …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… second fiddle to those from fungi when it comes to breaking down tough plant fibers. The Science Walk in a temperate … plant fibers. But are they both actually doing the job? By analyzing the enzymes present in the complex organic … active in fixing and metabolizing nitrogen, a key ecosystem nutrient. The Impact This study is the first to dig into a …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Science Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … Additionally, 40 percent of the proposals were submitted by researchers who had not been a primary investigator on … of the marine food web base, they also feature in many nutrient cycles. Thus, having reference  Chaetoceros genomes …
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Taking Stock of the Known and Unknown Microbial Space
… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of … run the world, playing key roles in regulating global nutrient cycles. The information gained from understanding … of the available datasets. Efforts to recover MAGs by extracting data directly from environmental samples over …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 … Brassicales Genome Initiative. Brassicales is represented by more than 4,700 species, and the proposal focuses on … research for bioenergy production and algae’s roles in nutrient cycling, now a facet of the  Fungal & Algal Program …
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements metagenomics studies. The … the value of conducting large-scale single cell genomics by collecting nearly 500 single cells from a single low … The Impact Though microbes help regulate the planet’s nutrient cycles and are potentially of use in fields ranging …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint … Nevada, Las Vegas, and the Desert Research Institute, the 2025 NeLLi Symposium delves into the most recent expansions …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences … sequencing or DAP-seq. The technology was developed by Ronan O’Malley , who leads the Sequencing Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome … difficult. Our Plant Gene Atlas resource addresses that by providing standardized experimental conditions, tissue …
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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome …
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