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BGC Atlas: a web resource for exploring the global chemical diversity encoded in bacterial genomes
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New Research Sheds Light on Diversity in the Deep Sea
… microbial communities across five oceanic regions. In doing so, they found a high degree of variability in the … ecosystems. This means they hold clues for understanding how life thrives in extreme environments. They also produce … conditions. They identified 511 new or recently discovered genera of bacteria and archaea. Many of the samples shared a …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… biological samples (like cell media or lake water) without doing a metabolite extraction? Or are these samples too … A(nswer): Possibly, it would depend on the sample. However, we don’t do this because they typically contain … are strongly sorbed to the clays. Sandy soils are much more likely to work well for metabolomics.  Q:  What …
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A Plant Root Atlas for Tracking Developmental Trajectories
… an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and … that could help researchers track cell development and how they determine identity, as well as the roles played by … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… them. But what trends govern those virus-host interactions? Do generalist viruses run rampant, capable of infecting … then allowed the team to ask, for the 34 hosts they found, how prevalent in the mat are their viruses? The abundance of …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … in which organisms, when are they expressed, and what they do. Summary The name PhycoCosm stems from the Greek phykos , … components that make it useful for scientific inquiry: it shows a full phylogenetic tree of more than 100 sequenced …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … in which organisms, when are they expressed, and what they do. Summary The name PhycoCosm stems from the Greek phykos, … components that make it useful for scientific inquiry: it shows a full phylogenetic tree of more than 100 sequenced …
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Fungal & Algal Program User Advisory Committee
… and scientific relevance and quality. The Committee does not perform management functions nor does it direct the Programs’ management teams on how to operate and manage the Program.   …
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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last … biology. The information could be useful toward the DOE’s interest in harnessing the crop toward producing … Symposium series. The online seminars foster discussion on how to best capture and characterize uncultivated viruses, …
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Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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