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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving Diversification of Secondary Metabolism in the Amphibian Gastrointestinal Symbiont, Basidiobolus
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Webinar: MycoCosm Tutorial
… While are still working on finalizing the tree and related publication the tree is still in development and not … 15.  Q: What is the user annotation process (are these functional annotations) and how are these integrated within … features do you filter? remove/keep and is it possible see original vs. filtered features? A: Filtering of imported …
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Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by Clarivate Analytics. Those from the JGI whose publications rank in the top 1% by citations for field and … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … : “Redefining Virus Macroevolution” Edward Holmes is an evolutionary virologist at the University of Sydney who has … of 2020. His work has also yielded insights into the origin and spread of viruses like dengue, Ebola, hepatitis …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … control over reproduction was a likely key to this evolutionary transition. Using this model, researchers also … hosts pass on beneficial symbionts between generations. The origin of this relationship though, is often antagonistic …
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Advances and challenges in understanding evolution through genome comparison: meeting report of the European Molecular Biology Organization (EMBO) lecture course “Evolutionary and Comparative Genomics”
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… industry, and government organizations for three days of scientific presentation, interactive panel discussions, …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Welcome back to Natural … sequencing, I understand. Do you want to tell us about the origin of that, or?   NANCY: Well, so, I’m involved in two …
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SPRUCE-ing Up Science
… a soft breeze ripples through the trees in his backyard. Originally from northern California and one of the first … was just beginning to develop and expand into the world of evolutionary biology. And around that time, a collaborative … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species decompose debris, mobilize nutrients from that … some fungal species, other fungi will fill in needed functionalities. This work also shows new overlap between …
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