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… (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … List of pubs available on NCBI … Implementation of the Index of Cell Identity as an R package … Education … Selected Publications … Software …

… in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … in Science Advances , researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … validation.  Microbes run the world, playing key roles in regulating global nutrient cycles. The information …

… focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to … genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors. Nature … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …

See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …

… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … 2019 Genome Watch articles as a way to expose readers to a broader genomics perspective. Woyke spread the word among … And it makes sense to Woyke why JGI would have this role. “We work with leaders in environmental genomics from …

… begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … the microbes within the soil. To get a clearer picture of how burned ecosystems return to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting microbial genes with …

… the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a … worked with Zhong Wang while Karen Tolentino worked with Brachypodium researcher John Vogel. Other students hosted …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … JGI.  To understand the microbiome systems underpinning a broad range of environmental challenges, characterizing … substances from the environment, viruses could play a role. “If you want to do anything with a microbiome — you …

Joint Genome Institute (JGI). Tina serves in an HR advisory role to Division/Area management and supervisors to … Sonoma State University. Early on Tina knew the importance of understanding human and group behaviors as her role in HR evolved with more exposure in employee relations …

By studying the structure and function of a cyanobacterial protein, researchers have new insights … challenge of understanding one of these proteins — and its role in photosynthesis — in the cyanobacterium  … an interesting zinc-mirror heme site that plays a key role in sensing iron and regulating metabolism as …

… growing on plants, with fluffy white bolls bursting out of the green pods in every direction. There are 100 million … on cotton production, and the crop’s annual economic impact of $500 billion worldwide underscores its value and … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …

… three new members earlier this month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of … experience representative of the interests of the JGI’s broad user base, including both university and national … its programs, capabilities, and resources to best meet the broad base of user community needs. Wilbanks is an Assistant …