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A perspective: Metatranscriptomics as a tool for the discovery of novel biocatalysts
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Streamlining the Design-to-Build Transition with Build-Optimization Software Tools
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary … in algal communities, including the algae-associated microbiomes that influence algal diversity and gene … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …
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FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
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Simon Roux
Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France Ph.D. in Bioinformatics, Ecology and Evolutionary Biology, Université … Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …
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Sequencing Submission Requirements for DNA Synthesis
… please include the following items: … Sequence files for all constructs should be emailed to  Miranda … Synthetic Biology Project Manager . … How To Create an Annotated GenBank File There are several easy-to-use open source tools for converting DNA sequence files into well-formed …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Eelgrass Proves to Be Much Younger Than We Thought
… most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, scientists have shed … — including the eelgrass genome assembly that enabled analysis of the whole genome duplication event — bioinformatics expertise, as well as sequencing for all …
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The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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JGI@25: Strengthening Soybean
… 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable … ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and … evolution of sequencing technologies and the evolution of bioinformatics.”  P. pachyrhizi has a very large and complex …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Spencer Chair in Genomics at the HudsonAlpha Institute for Biotechnology! Loretta Spencer served as a manyterm … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … of human chromosome 19 The DNA sequence and comparative analysis of human chromosome 5 The sequence and analysis of …
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