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Complete genome sequence of the acetate-degrading sulfate reducer Desulfobacca acetoxidans type strain (ASRB2T)

JGI@25: Roots of a Mutualist Relationship

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal … Fungal Datasets …

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Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics

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Spacer2PAM: A computational framework to guide experimental determination of functional CRISPR-Cas system PAM sequences

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Olpidium, The Key to the Origin of Terrestrial Fungi

… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … to terrestrial habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of …

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Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes

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Genome expansion by allopolyploidization in the fungal strain Coniochaeta 2T2.1 and its exceptional lignocellulolytic machinery

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Vertical and horizontal gene transfer shaped plant colonization and biomass degradation in the fungal genus Armillaria

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A nucleoside signal generated by a fungal endophyte regulates host cell death and promotes root colonization

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Reduced methane emissions in transgenic rice genotypes are associated with altered rhizosphere microbial hydrogen cycling

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GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes