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Open Frameworks Training the Next Generation of Scientists
… Educational training technologies provide opportunities for students and professors alike The Science In  PLoS Pathogens , a team of … involving academic faculty and researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User … MycoEd receives organizational and developmental support from KBase (The …
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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Microbial species delineation using whole genome sequences
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Improving Microbial Genome Annotations in an Integrated Database Context
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The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes
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Abiotic selection of microbial genome size in the global ocean
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … “They developed parallel algorithms to perform ‘all-vs-all’ comparisons and graph clustering able to run in such highly …
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by … this identification, metabolomics enables functional genome annotation, improves understanding of the role small molecules play in diverse biological … Find more details on the instrumentation we use and our methodology for …
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User Support Analysis Group
… The User Support Analysis group provides computational analysis for new … for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows for new product …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … Emiley Eloe-Fadrosh is the Metagenome Science Program Head at the JGI. …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V … On Jennifer Doudna's Nobel Prize … Berkeley Lab coverage …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of … and the focus of a  recent paper published in  Microbial Genomics .   “Studying actinomyces, especially … a scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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