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Programs & Platform Leads
… the JGI plays a leadership role in enabling the frontiers of research related to DOE’s missions in bioenergy, carbon … JGI researchers drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, … Metabolites, and DNA Synthesis Science Programs and draw from the infrastructure of Genomic Technologies and Data …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of …
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Comparative transcriptomics provides insights into molecular mechanisms of zinc tolerance in the ectomycorrhizal fungus Suillus luteus
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A Shrubbier Version of Rubber
Right now, our natural rubber comes from just one tree species: … that’s native to North America: guayule.  This episode was made in collaboration with our friends at the HudsonAlpha Institute for …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
To set up flexible, repeatable experiments on plants and microbes, … group at Berkeley Lab created a fabricated ecosystem – an EcoFAB. These small plastic growth chambers let researchers around the world compare their …
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Len Pennacchio
Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … is funded by DOE and through continued competitive grant support from NIH. … BA in Biology, Sonoma State University … in both the energy and health sectors. Mammalian Functional Genomics Lab VISTA Enhancers VISTA Cardiac Enhancer Browser …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … water samples when The Blob started. The samples were taken up and down the water column along the Line P transect, a …
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THE Bioenergy Tree
The US Department of Energy’s favorite tree is poplar. They’re the fastest growing trees in the Northern Hemisphere, making them … to making poplar an economical and sustainable source of energy and materials. …
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Methane Makers in Yosemite’s Lakes
Meet researchers who have hiked, rafted and met local wildlife (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. These lakes are isolated, …
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Sequencing Technologies
The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological … users. Adopting the latest  sequencing technologies has allowed the JGI to increase sequencing output while …
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Work With the JGI! Tips for a Winning CSP Proposal
Science Program gives researchers access to all kinds of sequencing, ‘omics and bioinformatics capabilities — and it’s open to scientists at any career stage, anywhere in the world, for free. We accept new projects related … times a year. A few proposal calls have deadlines coming up – in January, March, and later on in the spring. In this …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of …
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