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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … JGI Plant Gene Atlas is a huge updateable transcriptome resource spanning diverse plant species. It was developed to … Centralized databases with large-scale transcriptome projects such as Expression Atlas and PPRD could help with …
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Matthew Kellom
… interest. Matt also supports various CSP and FICUS user projects for the Metagenome Program. …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research … the name suggests, there is metal in the hills, and it has legacy mining that goes back more than 100 years. And in … … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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JGI-UC Merced Interns Share Their 2021 Experiences
… virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate …
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Neha Varghese
… community. She also provides support for user science and projects through implementation of advanced analysis …
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A Complex Confection Decoded: Sugarcane Reference Genome
… cultivar R570 has been generated and  reported in the journal  Nature . The work led by researchers at Australia’s … Development (CIRAD), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … sugarcane was published as a step forward in this effort. Sequencing and assembling the genome required a custom …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… feedstocks of interest to the U.S. Department of Energy (DOE). (Poplar is a Flagship Plant.) To engineer them, … National Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … through the  Community Science Program , using long-read sequencing to assemble the repetitive areas of the complete …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… in some cases daily, check-ins with their mentors to ensure projects progressed despite the challenges of remote work. … with the UC Merced students is a fantastic component of our work,” said Nigel Mouncey, JGI Director. “This year is …
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Training the Next Generation of Talent
New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his … challenges UC Merced graduate students with individual projects at the DOE JGI that provide hands-on experience in … a part of the students’ thesis,” she says. “Second, we want our students to gain the opportunity to see what research is …
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations … prominently among the eleven proposals selected with four focused on biofuels and bioproducts. For example, …
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Picking Up Threads of Cotton Genomics
… underscores its value and importance in the fabric of our lives. In the United States, cotton production centers … including researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … added. “We must be careful who we ask to take on these projects due to their difficulty and complexity, but we have …
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