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The More the Merrier: Making the Case for Plant Pan-genomes
Context For the study, partly enabled by the JGI’s  Community Science Program , the team generated reference … these datasets, researchers made a pan-genome containing four  B. hybridum  genomes and many  B. distachyon genomes. … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Events
… is represented at conferences year round; find out where our researchers will be presenting next. Learn about …
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Three Join the JGI User Executive Committee
… in crops. He has been a PI or Co-PI on five user projects with the JGI, as well as served on review panels for the JGI Community Science Program (CSP) proposals. He  brings experience representative of the … will help the JGI shape its programs, capabilities, and resources to best meet the broad base of user community needs. …
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Axel Visel
Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation … Deputy for Science Programs. Click to learn more about our seven science program — their areas of focus, major … policy, engaging in interactions with the scientific community at large. … 2021 LBNL Director’s Award for …
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Dan Rokhsar
Genome Institute in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human … Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer …
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Pinning Down a Piece of Photosynthesis
National Laboratory’s National Synchrotron Light Source II, and SLAC National Accelerator Laboratory’s … experiments, so researchers have studied the blueprint plans that give rise to the protein parts of that machine — … In a project led by Blaby, through what is now the  Community Science Program Functional Genomics proposal call, …
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JGI announces second round of 2023 New Investigator awardees
Felipe Valdez-Nuñez  The JGI is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and from PIs who have … proposals — through the New Investigator call under our Community Science Program .  Below find a list of the second …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… propagated from cuttings represent a diverse collection sourced from half of the United States. As  reported January … sustainable alternative fuels. Common Gardens Are A Community Effort The common gardens began nearly a decade … by DOE’s Bioenergy Research Centers, which initiated the sequencing of the switchgrass genome. DOE’s  Billion Ton …
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Data Policy & Support
… … Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The Science … populations rely heavily on groundwater as their only source of clean drinking water. Over 90% of the PCE in the … ago. The NRAP site is still being monitored and the team plans to continue collecting data to understand the ERD …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… as carbon sinks and minimize their role as carbon sources. Summary Sphagnum, a genus of just under 400 mosses … by minimizing flood risks and filtering water. Peat formed there over thousands of years sequesters more carbon … was possibly driven by genetics, or even temperature. By sequencing the genome, researchers were able to pinpoint …
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