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Cultivating Symbiotic Antarctic Microbes
… and ‘omics techniques to experimentally determine that Nanohaloarchaeota are symbionts, rather than free-living … and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … superphylum of extremophilic archaea first outlined by JGI scientists and their collaborators in 2013. While most …
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Crysten Blaby-Haas
… Dr. Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the Molecular Foundry, a nanoscale research and … Bright Futures Academic Scholarship, 2002 – 2006 HCA Foundation Scholarship, 2002 & 2004 Graduate Student Award, 59th …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal … also described in Haridas S, Salamov A, & Grigoriev IV. (2018) Fungal Genome Annotation. In Methods in molecular … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Expanding Virophage Diversity
… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … Paez-Espino  discussed an early version of the paper at the 2018 Viral EcoGenomics & Applications (VEGA) Symposium. The …
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Nikos Kyrpides
… the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He … led the development of the genome analysis and Bioinformatics core at Integrated Genomics Inc. in Chicago, IL. He … Pavlopoulos GA et al. (2023) Unraveling the functional dark matter through global metagenomics. Nature . …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted … The webinar featured  Trent Northen and Ben Bowen of the  JGI Metabolomics Program , along with Jenny Mortimer, … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory. The JGI sequenced the shrub willows through the  Community …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the … path, has previously proven successful; in the 2018-2023 five-year strategic plan, the JGI accomplished 90% …
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CSP Functional Genomics
… Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept … Genomics Project led by the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility of Lawrence … annotation to harness the genomic data. Reported October 8, 2018, in Nature Genetics , a team led by researchers at the …
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Pinning Down a Piece of Photosynthesis
… are easy to point out. Plants, algae and cyanobacteria create the air we breathe and the fuel for food webs as they … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … crops and creating bioproducts. So Blaby-Haas and her colleague Ian Blaby, a coauthor of the new study, set out to …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On … August 6th? All URLs with a domain of  https://phytozome.jgi.doe.gov will be forwarded ( where possible ) to their … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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