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Draft Genome Sequence of Syntrophorhabdus aromaticivorans Strain UI, a Mesophilic Aromatic Compound-Degrading Syntroph
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Disclaimer
… NOTICE Information from this server resides on a computer system … the United States Government nor the University of California nor any of their employees, makes any warranty, … including the warranties of merchantability and fitness for a particular purpose, or assumes any legal liability or …
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Plant Microbial Interactions Group
… are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … barcode-based genetics (RB-TnSeq), and computational genomics to better understand the plant-associated … experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into biological function. Through our …
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JGI announces final round of 2022 Functional Genomics awardees
… Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through our …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a … my first publication and it feels so rewarding,” Wint said. For Axel Visel, JGI Science Deputy and a co-founder of the … to learning about how to navigate and analyze large genomic datasets during the internship, Wint also began …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Australia but is increasingly farmed in other countries for essential oil production. The recent assembly of two … the conservation and evolution of the genes responsible for terpene synthase (TPS) enzyme production. This family of … desirable from a biofuels production perspective. By using genomic database alignment tools, researchers searched for …
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Supercharging SIP in the Fungal Hyphosphere
… successfully automated aspects of a commonly-used process for studying microbial communities, with results published … live in complex communities, like within soils or the gut, they are difficult to study individually. Many … with potential applications in industry and biotechnology for the production of  clean energy . Summary Arbuscular …
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Richard Fox
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… shed more light on microbial communities than ever before — especially with the prospect of meta-analyses boosted … said. Informed by other community-driven standards from the Genomic Standards Consortium, Wilhelm and Simpson assembled … this was the first workshop of its kind on SIP metagenomics,” Malmstrom said.  Increasingly, efforts like these …
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The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow
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JGI@25: Using Team Science to Build Communities Around Data
… a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence … for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … Fungi — from phylogenetic relationships to evolution of genomic mechanisms — resulting in the diversity of fungal …
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