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Identifying the Microbial Cleanup Crew at a Superfund Site
… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … break down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …
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Dan Rokhsar
… JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed … human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued to … AB in Physics, Princeton University, NJ MS in Theoretical Physics, Cornell …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and … or C-fern, specifically has been studied in plant research laboratories and plant biology courses across the … The work conducted by the US Department of Energy Joint Genome Institute is supported by the Office of Science of …
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Data Policy & Support
… Read our research integrity and data code of conduct. … JGI Scientist Code of Conduct … Additional Resources  …
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Natural Variation in Lignin and Pectin Biosynthesis-Related Genes in Switchgrass (Panicum virgatum L.) and Association of SNP Variants with Dry Matter Traits
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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world
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The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown‐rot mechanism involving Fenton chemistry
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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, … conducted by the USA Department of Energy (DOE) Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … name suggests giant miscanthus literally towers over most researchers due to its prodigious capability for growth. …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and you’re … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …
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