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A Complex Confection Decoded: Sugarcane Reference Genome
… the genetic code of sugarcane, researchers were able to map the location of genes that provide resistance to the … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … HudsonAlpha Institute for Biotechnology and the Arizona Genomics Institute. The work was partly enabled by the JGI’s …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of … collaborations were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson … Platform Ben Bowen and Katherine Louie for the JGI Metabolomics Platform Blake Simmons for The BioManufactory …
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Streamlining the Design-to-Build Transition with Build-Optimization Software Tools
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A perspective: Metatranscriptomics as a tool for the discovery of novel biocatalysts
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Analysis of Brachypodium genomes with genome-wide optical maps
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Active Site and Laminarin Binding in Glycoside Hydrolase Family 55*
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Prodigal: prokaryotic gene recognition and translation initiation site identification
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Three Join the JGI User Executive Committee
… The JGI User Executive Committee (UEC) recently welcomed three … operations and expertise in mass-spectrometry-based metabolomics and lipidomics to make recommendations to best support … panels for the JGI’s Functional Genomics CSP and the JGI-EMSL FICUS programs and brings expertise in metagenomics and …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale … investigator on any proposals previously accepted through JGI’s calls. Nearly 200 Terabases of data are expected to be … The JGI’s large-scale call included algal genomics as a focus area, and one of the accepted proposals …
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Glacier ice archives nearly 15,000-year-old microbes and phages
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… RNA to understand gene expression, and developed new tools to map that soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved …
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JGI@25: Solving the Mystery of the Missing Oil
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … array developed at Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in …
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