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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal … concept, researchers developed an algorithm that “taught” a computer how to classify 101 representative genomes of … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep … ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep … (Nachwuchs-gruppe “Dr. Alexander Probst”), and the NOVAC project of the German Science Foundation (grant number DFG …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, … — but the experts we were able to work with on this project to ask questions about structure and function,” … energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… in five years, have come out of the JGI-supported project. “The JGI DNA Synthesis Science Program has been … on thiolases, a superfamily of enzymes found only in microbes, which make carbon-carbon bonds. This ability is … energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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Emiley Eloe-Fadrosh
Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in … and characterize genomic information from uncultivated microbes and viruses. Prior to joining the JGI, she was a … Program; Genome Canada Large-Scale Applied Research Project Competition; NASA Exobiology; Graduate Women in …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as … … Adaptive strategies in a cosmopolitan and abundant soil bacterium: genetic microdiversity or core metabolic …
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Soil exchange rates of COS and CO18O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Computational Sieves to Filter Sequences There are more microbes on the planet than particles in a handful of dirt, … viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses … energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput …
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Rare earth element alcohol dehydrogenases widely occur among globally distributed, numerically abundant and environmentally important microbes
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The United States Culture Collection Network (USCCN): Enhancing Microbial Genomics Research through Living Microbe Culture Collections
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Frequently Asked Questions: Proposal Submission
… submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review … ; click on the call link to see specific details including project types supported, sample/capacity limits, and … There is no cost to the user and no granting of funds. … A complete listing of approved proposals can be found …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… as part of the Early Career Research Program (ECRP). His project, “Characterizing Virus-Driven Alterations of Microbial Metabolism in Model Soil Ecosystems,” uses a combination of experimental … analysis to better characterize how viruses infect soil microbes and influence how soil ecosystems function. He was …
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