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JGI Announces 2026 Functional Genomics Recipients
… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that …
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Jeremy Schmutz
… Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies … de novo plant assembly and the post-genome computational analysis at HudsonAlpha. … kingdom. Nucleic Acids Res . 51, 1–24.Lovell, JT et al. 2021. Genomic mechanisms of climate adaptation in polyploid …
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JGI announces final round of 2022 Functional Genomics awardees
… genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that …
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2025 NeLLi Symposium
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JGI at the AGU Fall Meeting
… on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production … “Microscopic time travelers: A finely tuned, time-resolved analysis of viral and microbial communities in the Erpe … above-ground greenhouse gas fluxes with subsurface nutrient cycling at an intensively-managed cattle grazing …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… also collaborated to advance computing infrastructure and analysis. This way, JGI users — both primary, … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the … freshwater ecosystem works. When she set out to analyze 500 metagenomes from this sample set through the Community …
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DOE JGI Metagenome Workflow
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Terabase-scale metagenome coassembly with MetaHipMer
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ClaMS: A Classifier for Metagenomic Sequences
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… active in fixing and metabolizing nitrogen, a key ecosystem nutrient. The Impact This study is the first to dig into a … into the microbial involvement in carbon and nitrogen cycling and forest floor ecosystem processes. Pinpointing … able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) …
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iPHoP: A Matchmaker for Phages and their Hosts
… environmental processes like  carbon fixation , nitrogen cycling and methane production. Meanwhile, environmental … day, these phages could boost plant-microbe interactions, nutrient cycling, or carbon sequestration. Summary Existing … of the roles viruses and their host microbes play in nutrient cycles. …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… our scientific mission.” Strategic Plan Highlights:  Nutrient cycling theme. Advancing the JGI’s ability to predict and …
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