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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to resources and promoting data … rights under JGI’s policy. In parallel, as of March 2nd, 2021, the JGI temporarily halted all automated submissions …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… to learning about how to navigate and analyze large genomic datasets during the internship, Wint also began … a virtual four-day data carpentry workshop for the incoming 2021 JGI-UC Merced interns to help familiarize incoming … year of PhD research at UC Merced. She plans to continue expanding her understanding of mathematics and …
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How to Target a Microbial Needle within a Community Haystack
… A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … that play key roles in global biogeochemical cycles remains unexplored and uncultivated. Developing a more targeted …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of … cornerstone of ActinoBase,  a public platform built on the knowledge of researchers studying actinomycetes and the focus of a  recent paper published in  Microbial Genomics .   “Studying actinomyces, especially Streptomyces …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data …
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JGI Announces 2026 New Investigator Portfolio
… Kumar Gautam, Gareth Gillard, Audrey Goeckner, Jennifer Goff, Sarah Gonzalez Henao, Yang Hai, Julia G. Harenčár, … these researchers will harness capabilities including metagenomics, metatranscriptomics and genome assembly to … to coastal wetlands and permafrost. Their work advances genomic discoveries that can help lead to applications …
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Enlarging Windows into Understanding Gene Functions
… Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first … in the genome by adding tagged transcription factors to a genomic DNA library. “It’s an innovative way to rapidly … proposal through the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital …
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Recoding of stop codons expands the metabolic potential of two novel Asgardarchaeota lineages
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Allopolyploidy expanded gene content but not pangenomic variation in the hexaploid oilseed Camelina sativa
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using … Science Program . And the work is part of a  larger CSP Functional Genomics proposal to understand terpene  synthesis and … a DOE Joint Genome Institute Community Science Program (JGI-CSP) grant (CSP2568 to P.Z., ES and AH), and by a …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee … For example, viruses which infect the photosynthetic cyanobacteria found throughout the planet’s oceans can exert … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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