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… on computational and experimental approaches to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project … regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria Release Plant-Available …

… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … not be possible with traditional approaches. … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in … mycorrhizal fungi. Microbiome 199 Needham, D.M. et al. 2019. A distinct lineage of giant viruses brings a rhodopsin …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … possible to do something that the field refers to as “genome mining”. So, if you can sequence the DNA and actually … all of the genes. So that’s one of the real utilities for genome mining is you can identify biosynthetic gene clusters …

… enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us genome miners get really jazzed about finding enzymes that …

… is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … in a Two-Protein-type V-C CRISPR System. Mol Cell. 2019 Feb 21;73(4):727-737.e3. doi: … and metabolism through reconstruction of microbial genomes from the environment . Nature. 2004. 428, 37–43 …

… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional approaches. … fields. A public repository of 52,515 microbial draft genomes generated from environmental samples around the …

Metagenome-assembled archaeal genomes provide new insights into … metabolisms is “vastly underestimated.” In the March 4, 2019, issue of Nature Microbiology , they mined the … and for the JGI Annual Meeting closes on March 11, 2019. Novel Yellowstone archaeon belongs to Korarchaeota …