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JGI@25: Using Team Science to Build Communities Around Data
… will help solve energy and environmental challenges. The 1KFG project represents affiliations at over 180 … Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence 1000 fungal genomes to … Science Program proposal from James Leebens-Mack of the University of Georgia, along with 100 of his colleagues in …
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When “The Blob” Made It Hotter Under the Water
… as hurricanes and droughts. Another one began in late 2013, when a large patch of warm ocean water about a third the size of the United States began forming in Alaska. Over the next two years it slowly spread, raising … The Blob reached southern California. Steven Hallam of the University of British Columbia was already collecting ocean …
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Tracking the Origins of Methane-Producing Microbes
… hydrogenotrophic (most common); methylotrophic; and, acetoclastic. All three pathways require the gene cluster for … the National Academy of Sciences , researchers at Stanford University, the Chan Zuckerberg Biohub, and the U.S. … that were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most …
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Genome sequence of the Thermotoga thermarum type strain (LA3T) from an African solfataric spring
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Sequencing Technologies
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Plant Program
… in the DOE Bioenergy Research Centers. The  Plant Gene Atlas initiative develops gene expression catalogs across JGI … to experimental manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and … through model laboratory ecosystems. They are small plastic growth chambers where plants grow without soil. Using …
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CalTeach
… equity, and inclusion, with concurrent field work in local classrooms and tutoring centers. Cal Teach offers a minor in … as well as a unique opportunity to complete a California K-12 science or math teaching credential as an undergraduate …
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New Research Sheds Light on Diversity in the Deep Sea
… that live there.  Researchers from Portland State University and the University of Wisconsin-Madison collected 40 samples from … function in such extreme conditions. They identified 511 new or recently discovered genera of bacteria and …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… of this work.  Han is an Assistant Professor at Konkuk University in South Korea as well as a faculty affiliate in … nitrogen. Now, with insight into a specific enzyme class that’s important to the way many organisms function, … enzymes across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, archaea, …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… relative of SOD is P. infestans , responsible for the mid-19th century Irish potato famine.   Shortly before the … and Mycology Laboratory. Together with his colleague Douglas Schmidt and UC Davis professor David Rizzo, they … led by the JGI and Virginia Polytechnic Institute State University, was released to the public in a highly-cited …
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JGI@25: Solving the Mystery of the Missing Oil
Lab environmental biologist and current holder of the University of Tennessee-Oak Ridge National Laboratory … described the early efforts in his keynote talk at JGI’s 2011 Annual Genomics of Energy & Environment Meeting: “What we …
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