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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome … Area are also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As … who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We …
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Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations
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Complete Genome Sequences of Krokinobactersp. Strain 4H-3-7-5 and Lacinutrixsp. Strain 5H-3-7-4, Polysaccharide-Degrading Members of the Family Flavobacteriaceae
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal … relationships, and how the mutualistic associations allow host plants, such as candidate  bioenergy feedstock … will assist researchers in moving toward functional genomics studies to learn more about the inner workings of …
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The F-Box Gene Family Is Expanded in Herbaceous Annual Plants Relative to Woody Perennial Plants  
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VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families
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Exploiting members of the BAHD acyltransferase family to synthesize multiple hydroxycinnamate and benzoate conjugates in yeast
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Rare loss-of-function mutations in ANGPTL family members contribute to plasma triglyceride levels in humans
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Phylogenomic insights into the taxonomy, ecology, and mating systems of the lorchel family Discinaceae (Pezizales, Ascomycota)
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The JGI announces FY25 awardees for our Community Science Program Annual Call
… selected for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — … previous New Investigator awardee.  The CSP Annual call is focused on large-scale genomic science projects relevant to …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics … with other info such as their corresponding NCBI taxid? A: All download file formats are predefined but can certainly … Q: Has there been any interest in using JBrowse / JB2  for genomic views ( e.g.,: …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC Berkeley and the Innovative … genes. Further analysis led to the identification of a new family of Cas proteins, named Cas14. Using these sequences … The work was supported in part by grants from the Paul Allen Frontiers Group, the National Science Foundation …
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