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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Cultivating the Bacterial Microbiota of Populus Roots
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Contribution of calcium ligands in substrate binding and product release in the Acetovibrio thermocellus glycoside hydrolase family 9 cellulase CelR
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Draft Genome Sequence of Frankia sp. Strain QA3, a Nitrogen-Fixing Actinobacterium Isolated from the Root Nodule of Alnus nitida
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Genome Sequence of “Candidatus Frankia datiscae” Dg1, the Uncultured Microsymbiont from Nitrogen-Fixing Root Nodules of the Dicot Datisca glomerata
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Gene Expression: From On-Off Switch to Dial
… to expression, scientists can now opt for various shades of grey. The ability to fine-tune the level of gene … was led by Hal Alper, professor and associate chair at the University of Texas, Austin, and included researchers at the … area in the DNA, to determine which targets might benefit from an intermediate level of expression. Similar to the …
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Autophagy restricts symbiosis-associated cell death and regulates colonization by Serendipita indica in Arabidopsis
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use … The JGI updates its Sorghum bicolor reference genome and releases it to the community. 2014: GENCODE project begins. …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual … that the JGI has put together. In collaboration on a project with the Newman lab, an important question arose: … authority on viruses, Holmes was part of  the initial release the genome sequence for SARS-CoV-2 , back in January …
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10 From JGI on the 2019 Highly Cited Researchers List
… formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , which … of 21 fields appear on the 2019 list. Congratulations to: Project Manager Kerrie Barry, Cross-Field Category Fungal … Woyke , Biology & Biochemistry category Some highlights from projects each of these researchers were involved in …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… Dan Rokhsar, who also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an … a condition known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded …
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Doubling Down on Known Protein Families
… Harnessing the collective power of more than 26,000 microbiome datasets, all accessible through the publicly … ‘Dark Matter’ Microbial communities living everywhere from soils and stomachs to the deep sea are capable of doing … of functional diversity as well.”  Researchers from Harvard University, Indiana University. University of Crete …
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