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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March 17, 2020, a … took effect in six San Francisco Bay Area counties. The JGI, located at Lawrence Berkeley National Laboratory, is …
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Nitrogen cycling microbiomes are structured by plant mycorrhizal associations with consequences for nitrogen oxide fluxes in forests
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Transcriptomic atlas of mushroom development reveals conserved genes behind complex multicellularity in fungi
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Comparative Transcriptome and Secretome Analysis of Wood Decay Fungi Postia placenta and Phanerochaete chrysosporium▿ †
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Jeremy Schmutz
Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute … development in Setaria viridis and maize. Nature Plants 3:17054. Schmutz, J, & McClean P et al. 2014. A …
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JGI Workshop at SIMB NP Meeting
Jan. 7: New Capabilities to Study Secondary Metabolism   … intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, … available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, has been …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers … of the project’s completion and receive instructions for how to access your data, share with collaborators, and …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great …
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Natural Prodcast
Natural Prodcast is a “fireside chat”-style podcast about natural products and the science and scientists of secondary metabolism. … in the field about current and future developments, and how the JGI can be part of that space.   …
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Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published … machine learning tools. “This was very exciting to see how Rhondene not only embraced the research question and …
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