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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full … with new international collaborators and other scientific organizations. Fungal biologist Stajich from UC Riverside …
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John Vogel
… to this, he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind the development of numerous genomic resources that fostered the widespread adoption … and utilizing these resources to understand genome organization and regulation, abiotic stress tolerance, and …
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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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DOE Metrics
… hours.   FY 2025 DOE Metrics There were 2,627 unique* JGI users in FY2025 , which includes Principal Investigators (PIs), Co-PIs, and collaborators. *Unique users are counted once, even though an individual may have … Q2 is due to planned upgrade of the Laboratory Information Management System (LIMS) and temporary shut down of the …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive … genome sequencing, or only “true fungi”? A(nswer): Our focus is on fungi, algae, plants, and the microbial world but … are built? A: EcoGroups are built based on what is known about the organism’s ecology, mostly based on literature and …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… from plants, microorganisms, and environmental samples using targeted and untargeted approaches. The webinar … with metabolomics analysis.  Q: Can you give us an idea about the scale of an average study? How many samples are … information for funding by JGI? A: The JGI is not a funding organization. Rather, it makes its sequencing, synthesis, …
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The ectomycorrhizal fungus Paxillus involutus converts organic matter in plant litter using a trimmed brown‐rot mechanism involving Fenton chemistry
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High-Quality Draft Genome Sequence of Desulfovibrio carbinoliphilus FW-101-2B, an Organic Acid-Oxidizing Sulfate-Reducing Bacterium Isolated from Uranium(VI)-Contaminated Groundwater
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Thermus sediminis sp. nov., a thiosulfate-oxidizing and arsenate-reducing organism isolated from Little Hot Creek in the Long Valley Caldera, California
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Ray Turner Completes Last Tour of Lab Duty at JGI
… JGI’s Operations Deputy has come to a close as this previously retired Naval Commander retires from Berkeley Lab. For … recruitment of a new JGI Director, and towards the strategic co-localization of JGI and KBase at the … is still good. “I noticed right away,” said Ellen Ford about Ray’s personal impact on her, “that you started …
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Fungus Fuels Tree Growth
… a potential biofuel feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can … an endophyte, living between a plant’s root cells. The fungus is almost always found among and within poplar trees, and … were striking. Adding PM193 caused poplar cuttings to grow about 30 percent larger by dry weight than without PM193  . …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public databases and … that carry them were strikingly different in both size and organization: Mitochondrial genome size and structure varied … systems produce and manage energy. By advancing the JGI’s strategic effort to generate 10,000 high-quality, AI-ready …
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