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Genomic variation within the maize stiff‐stalk heterotic germplasm pool
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden … receive a lot of rain.  Previous analysis of the E. grandis reference genome, an international effort by a team that … plant, a number closely followed by E. globulus . Occurring in clusters or duplicate arrays, these genes are …
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Industry Engagement Program
… As a National User Facility, the JGI serves more than 2,500 … Genesis Mission. Launched in 2025, the initiative aims to accelerate scientific discovery, strengthen national security … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and … . The comparative framework provided by these high quality reference genome sequences could help researchers better understand related genes in more complex plants that could be applied toward DOE-relevant …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more complete … results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program … to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science … Linking lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic …
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JGI Mural
… The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic JGI contributions to advancing … was commissioned for the JGI’s 25th anniversary and done by Berkeley-based artist Nigel Sussman. It was dedicated at …
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Analysis of the Neurotoxin Complex Genes in Clostridium botulinum A1-A4 and B1 Strains: BoNT/A3, /Ba4 and /B1 Clusters Are Located within Plasmids
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… Large-scale comparative analysis leads to identification of … collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … collapsed, while these issues are not commonly seen with reference isolates. “For secondary metabolite discovery in …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s … Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing … mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel Sussman and dedicated at our …
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Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)
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Transcriptome analysis of Aspergillus niger xlnR and xkiA mutants grown on corn Stover and soybean hulls reveals a highly complex regulatory network
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