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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. … in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … regulation is critical to ensuring genes vital for growth and survival across various environments are …
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IMA genome-F18
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   … breadth of algal diversity, the numbers of sequenced algal genomes, and the quality of those genomes, is rising. The … hear from researchers who are applying genomic sequence information to BER funded activities of plant systems. We will …
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing environments … food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. …
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the … analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett Baker’s lab at … the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his … as a computational biologist. My primary future goal is to form a startup.” …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on marine microbial … were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be revisiting a number of notable achievements that showcase our …
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2023 Progress Report
Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, … annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating intra-department data …
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Chomping Toward Better Plastic Recycling
We know all kinds of things about plastic – except, how to break it down for recycling. But some hungry insects can digest plastic. …
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