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Back in the Lab: the 2023 Summer Intern Experience
… in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 gave interns the opportunity to be fully immersed in not only their work, but the …
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A Powerful Technique to Study Microbes, Now Easier
… National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure …
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“A STEM career is in reach and accessible”
… Interns from Antioch High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved … that increase participation in higher education and access to fulfilling science careers, JGI hosted five students from Antioch High School this …
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The Fungi That Survive In Antarctica
… and mighty. They survive everywhere from Antarctica to Joshua Tree National Park, despite extremely harsh … researchers Laura Selbmann and Claudia Coleine are working with scientists from around the world – and the JGI – to understand them better. …
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2023 Progress Report
… Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  … capabilities, large-scale data, and professional expertise to support the global research community in studies of … and environmental systems. We optimize our service to the community through responsibly managing our people and …
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Better Living Through Bioenergy
… Biofuels and bioproducts are a way to kick our addiction to fossil … research at the Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline … Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the … patterns of Puerto Nuevo’s coastal waters and sediment with collaborators at the Center for Scientific Research and …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, … to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… Back in 2011, JGI-supported researchers published a paper in … journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that … Associate Professor Matthias Hess, also the chair of the JGI User Executive Committee, on how that study went from …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake … at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge National … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also …
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Corals in Hot Water Get Help From Their Microbes
… As waters warm due to climate change, corals are in mortal … But corals comprise multiple organisms: a coral host, a photosynthetic microalgae, and a little-characterized …
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