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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Trent Northen
Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to … Schadt, C., Martin, S., Carrell, A. et al. An integrated metagenomic, metabolomic and transcriptomic survey of Populus … serves as the Deputy Director of the Environmental Genomics and Systems Biology at Lawrence Berkeley National …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … the paper was published in 2014, it has been cited 1,025 times and the seemingly humble common bean has fueled … Phaseolus as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz explained, …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… some songbird W chromosomes — suggest that they are advantageous enough to have evolved multiple times independently. … by the NSF Dimensions of Biodiversity Program (DEB-1542509 to S.D., DEB-1542486 to LBS, and DEB-1542599 to M.O.). …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… transformations.” The JGI’s large-scale call included algal genomics as a focus area, and one of the accepted proposals … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the entirety of a microbial community out in its natural environment, …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… proposals come from 80 full proposals, resulting from 95 letters of intent. For the first time, 63 percent of the … University of Minnesota to establish the Natural Products Genomics Resource Center. To help enable the discovery of … The work builds upon a pilot project to sequence antimicrobial-producing strains. Established by Handelsman, Tiny …
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The More the Merrier: Making the Case for Plant Pan-genomes
… said John Vogel, head of the Plant Functional Genomics program at the JGI and a senior author on the … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Boosting Small Molecule Production in Super “Soup”
… than were noted inside the cell. “One of the huge advantages of the cell-free system is that the cells are no … Rapid Prototyping of Genes and Pathways” at the JGI Annual Genomics of Energy & Environment Meeting on September 1, … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… waters that have an average surface temperature of about 58° Fahrenheit (14° Celsius) — a cool intermediate to the … point to this fundamental observation of cold and warm microbial networks, and just how clear and stark the … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Korea as well as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley … located at Berkeley Lab. In addition to providing metagenome mining for computational analysis of the AT enzyme … enzymes across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, archaea, …
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