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From Berkeley to Binghamton: Tracking Strawberry Evolution
… 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … known as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In “autopolyploids”, genome duplication occurs within a single species. By …
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JGI Workshop at SIMB NP Meeting
… a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI-UC Merced Interns Share Their 2021 Experiences
Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration of Phage Impact on … Lineage Specific Conserved Genes in Giant Viruses … Pan-genome Graphs: Approaches for Complete Categorization of …
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Genomic Characterization of Candidate Division LCP-89 Reveals an Atypical Cell Wall Structure, Microcompartment Production, and Dual Respiratory and Fermentative Capacities.
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Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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A telomere-to-telomere genome assembly resource of Bipolaris sorokiniana, the fungal pathogen causing spot blotch and common root rot diseases in barley and wheat
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Large Direct Repeats Flank Genomic Rearrangements between a New Clinical Isolate of Francisella tularensis subsp. tularensis A1 and Schu S4
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
Research Center One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… conditions and a specific microbial host to replicate. Sequencing genetic material directly from samples sidesteps … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … the world, finding over 125,000 partial and complete viral genomes. That study multiplied the number of known viral …
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