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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data … University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt Escobar and UC Davis Associate Professor …
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JGI@25: Stories from Intern Alumni
… . Over the next few months, we’ll be revisiting a number of notable achievements that showcase our collaborations and … the past 25 years, the JGI has hosted interns from a number of universities and organizations. From field research and …
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Alabama A&M Interns Access An Abundance of Knowledge
… JGI for research training experience. Enabled by the DOE RENEW initiative, undergraduate student Ti’Yanna Watson and … mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … experience in molecular biology and plant functional genomics, because this work is essential for improving crop …
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Styling for Safety: PPE, It’s the JGI Way
… Over the last few months, we found an increasing number of colleagues missing elements of the required PPE in the lab. To address this issue, we … to provide our colleagues with a visual representation of JGI PPE requirements. When working in the lab, it is … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Viruses Reprogram Cells into Different Virocells
… from The Ohio State University and the University of Michigan studying how virus infections cause significant … metabolic changes they’ve undergone. The Impact The number of microbes in, on, and around the planet is an astronomical … Researchers have the opportunity to combine the power of genomics and molecular characterization offered at multiple …
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SIPs with Standards
… SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to … more reusable, and more insightful, for the future of studying microbial communities.   …
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The More the Merrier: Making the Case for Plant Pan-genomes
… plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose many … senior authors. “It offers us the possibility to explore genomically the whole complex of progenitors and descendant … of polyploidy.” Evaluating Polyploid Genomes in a Pan-genomic Context For the study, partly enabled by the JGI’s  …
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Boosting Small Molecule Production in Super “Soup”
… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … , researchers led by Hal Alper at The University of Texas at Austin and Michael Jewett of Northwestern … Rapid Prototyping of Genes and Pathways” at the JGI Annual Genomics of Energy & Environment Meeting on September 1, …
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Boosting Small Molecule Production in Super “Soup”
… Yeast strains engineered for the biochemical conversion of glucose to value-added products are limited in chemical … an alternative format for chemical synthesis in the absence of cell growth by isolating the soluble components of lysed … Rapid Prototyping of Genes and Pathways” at the JGI Annual Genomics of Energy & Environment Meeting on September 1, …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the next generation of flowering vegetation. In … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … , is recognized as a mutualist, where both species of organism benefit from association, but was predicted to … researchers also generated the first transcriptomic dataset of sexual reproduction in early fungi and discovered genes …
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An Automated Tool for Assessing Virus Data Quality
… (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … to help researchers assess and improve the quality of metagenome-assembled viral genomes . The Impact The … DNA sequencing can help scientist to recover the genomes of these viruses and associate them with their microbial …
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