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… 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s … as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – … co-localization of JGI and KBase at the Integrative Genomics Building (IGB). Said Michael Brandt of Ray, “You …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a … crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … and environments. The long-term investments in both the genomics and gardens are helping these shrubby grasses …

… di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … role in regulating microbial cellulose production and biofilm formation, which affects a number of environments, … at the University of California, Berkeley and the Joint Genome Institute, a DOE Office of Science User Facility, …

… You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel … will investigate a diverse array of projects, including the genomic dynamics of biofuel-producing fungi, the effects of … explore microbial and plant interactions across unique ecosystems, from alpine soils to tropical glaciers.  Proposals …

… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … collaboration with the JGI Algal Program, which explores genomics of algal diversity and biology to support basic …

… for Biotechnology. Phytozome is the Plant Comparative Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and insightful …

… JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and …

… Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … “JGI is one of the largest producers of environmental genomics data and has a strong reputation in the community,” …

… Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network … Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire … in scale when running on DOE’s  exascale computing systems,” added Kathy Yelick, a professor of electrical …

… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically been limited due … are edited. With the help of CRAGE, the pairing proved to rapidly confirm enhanced production of 22 metabolites from …

… Interns contributed to a number of projects, from refining lab protocols at the bench to … has closed at the U.S. Department of Energy (DOE) Joint Genome Institute, a DOE Office of Science User … Asaf Salamov, Igor Grigoriev Project:  Training new JGI genomes with Tiberius Brandon Imstepf Mentor: Brian Bushnell …

… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a previous … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of …