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Enlarging Windows into Understanding Gene Functions
… four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … the structures and functions of the genes encoded in the genome sequence is part of the integrative science mission … Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The … form of another species, so the scientists had to use the genome itself.   Approximately 67 million years ago, the ancestor to eelgrass underwent a whole genome duplication event, doubling all of its chromosomes.  …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … the JGI DNA Synthesis Science Program, which started in 2012, and what they’ve discovered through their … The microbe can utilize carbon oxides, including the greenhouse gas carbon dioxide, to make valuable chemicals, …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of … Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information …
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A Step Toward Controlling Soybean Rust
… soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California
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Microbial communities and biogeochemical functioning across peatlands in the Athabasca Oil Sands region of Canada: Implications for reclamation and management
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal … Patterns of Adaptive Evolution . Mol Biol Evol. 2022 Feb 3;39(2):msab372.doi: 10.1093/molbev/msab372.   Byline: Ashleigh …
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DOE Metrics
… FY 2026 DOE Metrics Sequencing Quarter Total Bases (Trillions) …   FY 2026 Total   700.0     8,760     Q1 2026 175 313.081 179% 2,208 2,064 95.4% Q2 2026 175 243.806 139% 2,160 2,112 … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …
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PhycoCosm Tutorial
… the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of …
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Refining the Process of Identifying Algae Biotechnology Candidates
… multiple institutions have sequenced and analyzed the genome of an alga that thrives in saltwater (halotolerant) … feedstocks, algae are tiny but mighty. An analysis in the 2017 Bioeconomy Report estimated that the United States has … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Fishing for Novel Cellulose Degraders
… by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … to sort cells into several small pools, followed by whole genome amplification and shotgun sequencing. The team first … To validate the predicted cellulases from their captured genomes, the team then used DNA synthesis and cloning, …
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