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Two new high-resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species
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Biotech Partners Summer Intern Co-Authors NAR Paper
… juniors who participated in internships at the DOE Joint Genome Institute this summer through the Biotech Partners … the version 6 data updates and feature enhancements to the Genomes OnLine Database (GOLD) administered by the DOE JGI. … described his student’s contributions as reviewing close to 3,800 metagenomes to verify geographic locations and assign …
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Mindfully Moving JGI
… after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a … cleanup.lbl.gov .     … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and insightful …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … of DNA (up to 60 kb) in a single step, directly into the genome. “CRAGE is central to our ability to offer … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in …
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Accelerating Metagenomics Discoveries with Deep Learning
… biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector … algorithm — a convolutional neural network, called  ResNet 34   — in order to vectorize protein sequences. Sevim is part of the JGI Genome R&D Group and is one of more than 100 scientists and …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… 2 billion people on the planet, to you know, within my lifetime, we should hit around nine or 10, which is thought … think like it’s, it’s this unique time where the preceding 300 years, that change was not occurring at that pace, … See you next time. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Serrano said. This team quantified the expression of over 12,000 fungal genes, in addition to associated plant genes.  … and Henrik Scheller.  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Nick Everson
… previously served as JGI’s Business Manager from 2007 to 2012, overseeing all financial and logistics activities.  He returned to the Joint Genome Institute after serving as the Chief Operating … Berkeley Lab, he served in the US Navy for 6 years as a submarine electrician and a financial analyst in industry and …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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The Big Deal About Short Plants
… plant genetic sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
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