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JGI Welcomes New UEC Members
… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their … who represent the scientific areas of plant genomics, DNA synthesis and metabolomics, respectively. To …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… To boost crops more efficiently in the future, the evolutionary past may hold key insights. The way that plants … Korea as well as a faculty affiliate in the Environmental Genomics and Systems Biology Division of Lawrence Berkeley … as well as the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have … the microbes there,” said Simon Roux , the Viral Genomics Group Lead at the JGI.  To understand the … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along …
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Yasuo Yoshikuni
… of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, … and applications. This program has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also … production of biofuels and renewable chemicals, developing genome engineering tools for non-model organisms, modulating …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month events throughout April. This year, a new group at the … Plant Sale. All year, the JGI helps support finding solutions to clean energy and environmental challenges. And many … now IGB-wide ZERO Waste Initiative began its most ambitious project yet: a special recycling program to recycle lab …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated … viruses. The Science In the last thirty years, in environments all over the world, scientists have discovered … Nucleocytoviricota , these giant viruses boast larger genomes than many bacteria. Until recently, understanding of …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold much of … change. Researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team from Duke University, …
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the information technology company … “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to … more than 13 petabytes of data, accessible through the Genome Portal. “The task of making data more findable and …
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JGI Announces 2026 New Investigator Portfolio
… Gareth Gillard, Audrey Goeckner, Jennifer Goff, Sarah Gonzalez Henao, Yang Hai, Julia G. Harenčár, Sarah Hu; [Row … N. Zepernick.    Each year, the JGI solicits novel research projects from PIs who have not led any previously accepted … including metagenomics, metatranscriptomics and genome assembly to investigate microbial and plant …
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An Automated Tool for Assessing Virus Data Quality
… Through advances in sequencing technologies and computational approaches, more and more virus sequences are being … recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a previous …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… single drop of water could outnumber a small city’s population, the number of viruses in the same drop—the vast majority … archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes … co-cultivated with amoeba or with their hosts, though metagenomics is now making it possible to seek out and …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Congratulations to the 2023 Highly Cited Researchers from the … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the … as a Nature Microbiology study that leveraged population genomics to investigate archaeal hitchhikers and found that, …
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