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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant … human (for the first time) gut and taxonomically classified into 27 distinct clades (17 of them without previously known …
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JGI Hosts GPU Hackathon in May
… (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … hosted at the Hackathon, with 1-2 mentors per team. Participants will be expected to have some experience with OpenACC …
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Fungus Fuels Tree Growth
… partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Program in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team … team also observed that the plants instead put more energy into growth, noting they increased expression of genes …
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Virus-Microbe Interactions of Mud Island Mangroves
… school plans. “The SCGSR gave me some great insight into my career path,” he said. “I much preferred the …
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Gene Expression: From On-Off Switch to Dial
… outlines a roadmap that is transferable to other systems, expanding the technologies available for other JGI users … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Understanding Wildfire Recovery, Starting in Soil
… to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … of a recovering soil microbiome provides a window into how to model and track the forest recovery process.  … they reconstructed and examined over six hundred bacterial genomes — mainly actinobacteria, as well as proteobacteria, …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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JGI Early Career Researchers Featured in mSystems Special Issue
… Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to recover rare … processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on …
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JGI Announces 2026 New Investigator Portfolio
… including metagenomics, metatranscriptomics and genome assembly to investigate microbial and plant …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Data & Samples tab. Front their you can click on Data and into the Data Portal where if you click into a data product, you can read more and download the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… “It’s 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another … appointments at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … spots for symbionts,” Woyke said. “Yet the project took us into a very different direction,” she added. Volland took on …
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