Results

Chromosome-scale Genome Assembly of the Most Abundant Ectomycorrhizal Fungus Cenococcum Geophilum Reveals Massive TE Expansion and RIP Defense Mechanism
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Progress Reports: 2002–2020
… Click the cards below to view downloadable pdfs of previous Progress Reports from the Joint Genome Institute.  … FY13 Progress Report … FY12 Progress Report …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … thousands to millions of copies of a particular DNA sequence from just a few pieces of DNA. Summary The extreme … the JGI’s Community Science Program , the team used metagenome assemblies, transcriptomes and single amplified …
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How Microbes Can Protect Plants in Drier Straits
… A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … to living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of …
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The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry
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Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus: Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems
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Genomic Characterization of Candidate Division LCP-89 Reveals an Atypical Cell Wall Structure, Microcompartment Production, and Dual Respiratory and Fermentative Capacities.
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Large Direct Repeats Flank Genomic Rearrangements between a New Clinical Isolate of Francisella tularensis subsp. tularensis A1 and Schu S4
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Diverse and unconventional methanogens, methanotrophs, and methylotrophs in metagenome-assembled genomes from subsurface sediments of the Slate River floodplain, Crested Butte, CO, USA.
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A telomere-to-telomere genome assembly resource of Bipolaris sorokiniana, the fungal pathogen causing spot blotch and common root rot diseases in barley and wheat
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and …
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