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Exploring Possibilities: 2022 JGI-UC Merced Interns
… In this short video, UC Merced undergraduate and graduate students share how their summer … mentors  Zhong Wang and Bryce Foster Sivagunalan Thamilarasan and mentors Zhong Wang and Bryce Foster Feng Yu and … Coclet and Simon Roux Tyrome Sweet and mentor Jonelle Basso Yumary Vasquez and mentor Juan C. Villada Natalie …
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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy … culturally, and ecologically important fungi, widely prized as a culinary delicacy, but also because they influence … acquire carbon from lignocellulosic-abundant matters such as plant litter and to incorporate the assimilated carbon …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is … U.S. DOE User Facility: Learn About Available Expertise and Resources, Open-Call Opportunities, and Important Tips for … 13 8:12 am Convention Center eLightning Theater IV: Kuno Kasak, University of Tartu (lightning talk): “Wetland …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change … impact of a large-scale heatwave event in the ocean known as “The Blob.” The event was recorded during a long-term study of microbial … This work was performed under the auspices of the Scientific Committee …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the … pathways used by the filamentous fungus  Neurospora crassa, and to identify and decide on the order in which this … available at the Fungal Genetics Stock Center. This work was supported by an Energy Biosciences Institute Grant, a …
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Effects of Polar Light Cycle on Microbial Food Web
… Populations of Antarctic lake microbial communities change with the seasons. The Science Light-harvesting bacteria (phototrophs) … time-series study offers a first glimpse into a full season’s cycle of this polar environment. This cycle suggests … This work was supported by the Australian Research Council …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between … fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … . High-throughput stable isotope probing (SIP) proved to vastly reduce labor and improve results. Applying this method …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex … markers of sex enables scientists to develop molecular assays that can distinguish males and females even when … in a plant sex chromosome. Palindromes are large inverted repeats with highly similar sequences so that their sequences …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome … of problems surrounding differential distribution of repeats in genomes.” He’s working with Rokhsar on a newer …
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Forming Scientific Connections and Building Community
… pick highlights from their summer experiences. This year the U.S. Department of Energy (DOE) Joint Genome … say about their experiences and what they’ll take with them as they go forward in their careers.   Listed below are the … is very sentimental to me.” Mentors: Crysten Blaby-Haas & Bikash Shrestha Project: “ Detecting Isotope Bonds in …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Novel archaeal lineage found in Yellowstone may have been … a novel phylum-level lineage of archaea with at least two major subgroups dubbed Marsarchaeota. The Impact … number of biotechnological applications. Molecular biology has benefited from heat-stable enzymes derived from …
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Tracing the Evolution of Shiitake Mushrooms
… the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the … By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 existing sequences, this work … evolution could provide strategies for converting plant waste into sugars for  biofuel production. Additionally, …
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