Results

The genome of the polyextremophilic yeast, Naganishia friedmannii, reveals adaptations involved in stress response pathways, carbohydrate metabolism expansion, and a limited DNA repair repertoire
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Mining Metagenomes for Cas Proteins
… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by … Institute (JGI), a DOE Office of Science User Facility. The sequences were then biochemically characterized by a team …
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Tina Clarke
… Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources Division Partner for the Joint BioEnergy Institute (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in an HR advisory role … State University. Early on, Ms. Clarke knew the importance of understanding human and group behaviors as her role in HR …
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Combating a Global Threat to a Clonal Crop: Banana Black Sigatoka Pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) Genomes Reveal Clues for Disease Control
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Qualitative and quantitative resistances to leaf rust finely mapped within two nucleotide‐binding site leucine‐rich repeat (NBS‐LRR)‐rich genomic regions of chromosome 19 in poplar
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Extracting the Secrets of Secondary Metabolites
… survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and CRAGE technologies. While CRISPR (Clustered Regularly … Repeats) is the leading tool for accurately editing genomes, its effectiveness has historically been limited due …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… On February 17, 2021, JGI and the Environmental Molecular Sciences … just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly … framework provided by these high quality reference genome sequences could help researchers better understand related …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… This is excerpted from the full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire … Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network … Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire …
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Conserved genomic collinearity as a source of broadly applicable, fast evolving, markers to resolve species complexes: A case study using the lichen-forming genus Peltigera section Polydactylon
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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The JGI Data Portal: Improving User Experience
… The human-centered, agile collaboration between the JGI and the … from the other JGI Portals, as well. “For thousands of scientists around the world, the JGI Genome Portal is a critical resource — it provides access to … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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