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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By … 100 were silent. Twenty years after the JGI united the genomics expertise of three national labs in one long … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can show which microbes …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … were able to provide colleagues at the Salk Institute with genomic DNA samples from Ruminococcus flavefaciens …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … and environments. The long-term investments in both the genomics and gardens are helping these shrubby grasses … P. virgatum on Phytozome … Plant Dataset …
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1T), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.,
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of … and the focus of a  recent paper published in  Microbial Genomics .   “Studying actinomyces, especially Streptomyces … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … in the journal Science. It detailed how they’d used metagenomics — a then-novel approach which allows scientists to …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI researchers are … beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell … Simon Roux, a member of Eloe-Fadrosh’s Environmental Genomics group, makes a pitch for readers to get involved in …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not … to carbon cycling, and is interested in understanding the genomic basis and ecological consequences of microbe-microbe … This work was supported by the Australian Research Council (DP150100244) and the Australian …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most … collaboration with the JGI Algal Program, which explores genomics of algal diversity and biology to support basic … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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