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… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and nutrient flux, and identify microbes assimilating … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … important cold-water communities of algae with warm-adapted ones, a trend that threatens to destabilize the delicate … UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted the metabolomic analysis … mass spectrometry-based measurements of primary and secondary metabolites from plants, microorganisms, and … New Investigator and  Functional Genomics proposal calls, projects can request up to 50 polar and 150 nonpolar …

… In honor of the JGI's 25th anniversary in 2022, we have … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … the world, finding over 125,000 partial and complete viral genomes. That study multiplied the number of known viral …

… Wednesday, March 18: "Genomics of Environmental Opportunism: Fungal Adaptation at the Edge of Pathogenicity" Workshop Steven Ahrendt … Friday, March 20: JGI-EMSL Workshop: "Toward 10,000 Fungal Genomes and Phenotypes" …

… more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive … tools for comparative genomics and community annotation. Presented by Igor Grigoriev, Steven Mondo, Steven Ahrendt and Sajeet Haridas. …

… A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers … software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread …

… JGI's Simon Roux describes the structure and content of the IMG/VR v3 … the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage novel …

… here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences … related fields who are interested in learning and sharing concepts, tools and research results in genomics, … devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Natalia …

… have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move … bringing this mobilome into light, and opening up new options for engineering these microbes in the future. Join Sarah Bagby (Case Western Reserve University) and Simon Roux (JGI) as they talk about their recent work on a time …

… School.  The workshop is addressed to students and professionals of biology, biomedical research, the health sciences … related fields who are interested in learning and sharing concepts, tools and research results in genomics, … devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by Rekha …

… Congratulations to the 2023 Highly Cited Researchers from the … were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the … He was also senior author on a study which identified new genomes highlighting the diversity of white rot fungi in the …